All modules for which code is available
- ambpdb.amber_to_pdb
- cphstats.cestats_run
- cphstats.cphstats_run
- cpptraj.cpptraj_randomize_ions
- leap.leap_add_ions
- leap.leap_build_linear_structure
- leap.leap_gen_top
- leap.leap_solvate
- nab.nab_build_dna_structure
- parmed.parmed_cpinutil
- parmed.parmed_hmassrepartition
- pdb4amber.pdb4amber_run
- pmemd.pmemd_mdrun
- process.process_mdout
- process.process_minout
- sander.sander_mdrun